BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011H01LP1|AL426273
(806 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1197 1476 0.0
>3x_Contig1197
Length = 4801
Score = 1476 bits (744), Expect = 0.0
Identities = 781/790 (98%), Gaps = 3/790 (0%)
Strand = Plus / Plus
Query: 1 atcagttcgtagtataaagtagatatagtttcagattgtaaatgctacggccgtacaaag 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4013 atcagttcgtagtataaagtagatat-gtttcagattgtaaatgctacggccgtacaaag 4071
Query: 61 cagcagtgtatccaatgtatacaaggcaggcaattaacaccaaccactgtcttgactgtt 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 4072 cagcagtgtatccaatgtatacaaggcaggcaattagcaccaaccactgtcttgactgtt 4131
Query: 121 cattttctgcggaacgacgaacattgctctcggttaggtaggtatttagtatataaagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4132 cattttctgcggaacgacgaacattgctctcggttaggtaggtatttagtatataaagta 4191
Query: 181 gcacatacttgaagggaaaattgcactgaaaaaacaaaccgtttgaaaaattagggagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4192 gcacatacttgaagggaaaattgcactgaaaaaacaaaccgtttgaaaaattagggagat 4251
Query: 241 aataaaggaacggtgaaaaaacgtgagacacaaacatcactaagtaatcgagactccgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4252 aataaaggaacggtgaaaaaacgtgagacacaaacatcactaagtaatcgagactccgta 4311
Query: 301 tttgttaacgatgggagcccgtgcgttattagtaattgatattcagaacgatttcttacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4312 tttgttaacgatgggagcccgtgcgttattagtaattgatattcagaacgatttcttacc 4371
Query: 361 accaaaaggatcattggcagttcaagatggtgatactatcatcgatcctgtcatccagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4372 accaaaaggatcattggcagttcaagatggtgatactatcatcgatcctgtcatccagct 4431
Query: 421 tttgcmagatcaggattgggactgtgttgccatgactaaagactggcatccgccagacca 480
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4432 tttgcaagatcaggattgggactgtgttgccatgactaaagactggcatccgccagacca 4491
Query: 481 catttcttttgcaaagaaccatggattaccagatttcagttcattcacctacgactcacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4492 catttcttttgcaaagaaccatggattaccagatttcagttcattcacctacgactcacc 4551
Query: 541 cgttcctgggagcaccgagaaacaaagtgctacgttatggccagtccattgtgtccagga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4552 cgttcctgggagcaccgagaaacaaagtgctacgttatggccagtccattgtgtccagga 4611
Query: 601 gacatggggctctgaggttccggaaaaattactcgctgaaattttaaagctcaaggtgcc 660
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4612 gacatggggctctgaggttccggaaaaattactcgctgaaattttccagctcaaggtgcc 4671
Query: 661 acataagattgtcaataaaggttacttatcggatcgtgagtatta-ttccggattcaacg 719
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 4672 acataagattgtcaataaaggttacttatcggatcgtgagtattatttccggattcaacg 4731
Query: 720 atatctggaatgatcatcacactgaac-ttgacgcctttttcaaagagaatgatgttact 778
|||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 4732 atatctgggatgatcatcacactgaactttgacgcctttatcaaagagaatgatgttact 4791
Query: 779 gaaatctatg 788
||||||||||
Sbjct: 4792 gaaatctatg 4801
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5097
Number of Sequences: 1807
Number of extensions: 5097
Number of successful extensions: 24
Number of sequences better than 1.0e-20: 1
length of query: 806
length of database: 10,358,551
effective HSP length: 16
effective length of query: 790
effective length of database: 10,329,639
effective search space: 8160414810
effective search space used: 8160414810
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)